Makes a bb_assembly object for alternate TxDB, OrgDb,and BSgenome packages

bb_assembly(
  TxDb,
  OrgDb,
  gene.id.column = "ENTREZID",
  display.column = "SYMBOL",
  BSgenome = NULL
)

Arguments

TxDb

string of the desired TxDb package

OrgDb

string of the desired OrgDb package

gene.id.column

string name of OrgDb column that refers to the given TxDb gene ID's

display.column

string name of OrgDb column that is the type of gene symbol to be displayed in plots

BSgenome

string of desired BSgenome package